BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E01SP1|AL425866
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig871 1561 0.0
>3x_Contig871
Length = 4172
Score = 1561 bits (786), Expect = 0.0
Identities = 788/790 (99%)
Strand = Plus / Minus
Query: 1 gatcgggaaaagtcaaatggatttttttattttaagtattaagcgttcctcatgttcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gatcgggaaaagtcaaatggatttttttattttaagtattaagcgttcctcatgttcttg 927
Query: 61 taaacaagcaaggaacgaaagagtaataaacaacacaaatcgtctcaagagaaagcaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 taaacaagcaaggaacgaaagagtaataaacaacacaaatcgtctcaagagaaagcaaac 867
Query: 121 aactcccaaagtaaaggaatcataggaaggccaaagcaataccagcggcagcaccaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 aactcccaaagtaaaggaatcataggaaggccaaagcaataccagcggcagcaccaatca 807
Query: 181 aagcgtcgttaattccaacttggtaagcagcaccagtagactctgaagtgcctgaagtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aagcgtcgttaattccaacttggtaagcagcaccagtagactctgaagtgcctgaagtgg 747
Query: 241 aagccccggtagaagaatcacttgtcaaggaagtcaaagttgcagacactgtagttttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aagccccggtagaagaatcacttgtcaaggaagtcaaagttgcagacactgtagttttgg 687
Query: 301 atgattgagattgagattcagaagtagttgtgttaatggaatgtatagtagatgtagtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 atgattgagattgagattcagaagtagttgtgttaatggaatgtatagtagatgtagtag 627
Query: 361 agttggtactgttagaagaagcaatagctaacaaaccggtagcacgagctaaagtatggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agttggtactgttagaagaagcaatagctaacaaaccggtagcacgagctaaagtatggg 567
Query: 421 aagtaattgcmgtcttcttgttttctaacgaagcagataaaacagacgcmacagaggcag 480
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 566 aagtaattgcagtcttcttgttttctaacgaagcagataaaacagacgcaacagaggcag 507
Query: 481 aagaaaccgatgcagctgaagcttcagaaacggcagaagcaacagaggcaacagaggcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aagaaaccgatgcagctgaagcttcagaaacggcagaagcaacagaggcaacagaggcaa 447
Query: 541 cagaggcaacagaggcaacagaggcaacagaagcagcggaggcagctgagacagatgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cagaggcaacagaggcaacagaggcaacagaagcagcggaggcagctgagacagatgcag 387
Query: 601 atgcaacggaagcctcagatgcaacagaagcggcagaagcagctgaggcagaagaagcgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atgcaacggaagcctcagatgcaacagaagcggcagaagcagctgaggcagaagaagcgg 327
Query: 661 cagaagaggcagcagcggcagaagaaaccgatgccacagaagcaacagaagcagcggatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cagaagaggcagcagcggcagaagaaaccgatgccacagaagcaacagaagcagcggatg 267
Query: 721 cttcagattggatagaagcctctgaaacaacggaggcagcgaaggcagcagccgaaactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cttcagattggatagaagcctctgaaacaacggaggcagcgaaggcagcagccgaaactt 207
Query: 781 gagaagctac 790
||||||||||
Sbjct: 206 gagaagctac 197
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5724
Number of Sequences: 1807
Number of extensions: 5724
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 16
effective length of query: 774
effective length of database: 10,329,639
effective search space: 7995140586
effective search space used: 7995140586
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)